Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015870379.1_cds_XP_016434061.1_30155
CDS Infomation

[gene=LOC107760515] [db_xref=GeneID:107760515] [protein=protein PHYTOCHROME KINASE SUBSTRATE 2-like] [protein_id=XP_016434061.1] [location=8030..9457] [gbkey=CDS]
Sequence

ATGGCTATGGTTAAAGTGACTTCAGCACTAGAATCCAACATGCCAAACAACTTGAACACA
AAAAGTGGCAACAATCTTCTTGATGCCTCATTTTCTTCTTACTTAAATGGTACTGAAGAT
ACCTTTGTACACAATCTTGAGTCAAGTGGAAATTTGAGCAAGAAAACAGATGATGGAGAA
ATAGATATATTTAGTGCAGAAAAATACTTCAATGAAGGGGTTGATGAAGAAAATCAAGAA
AATGTCACAAATAGTGAACCACAAAACAAACACAGGATTGATAAGCCAGCTACTAATATA
TCTTCTTTGAAACAAAATACTAGGCCTAAAACTCCAAGTATTCATTCAGAATCAAGCTGG
AATAGTAGAAGTGCATTATTGCAGAATATTTCAAGAAATCATCAGCATCAGCCACAAGCA
AATACCAATAACAAGTCCTACGGCAAGAAATTCCTTGCCAGAATTGGCTGCAATTGTTAT
TGTAAAGACAAGAATTCTGTTAAGGTTGATGATCAAGTCGGCGAAAACAGTTTCAACAAG
GGAAAATATCATGGAAAATCAAAACAAAACCCCATCAAAACAAGAAGCTTAGCTCAAAGT
TCTGAGTCCAGTACAACAGGAGCTAATCATCAAGATTTACACTTCAAGAAAATTGATGAA
TTGGGATTTGGAAAGGTTCCGGTTTTCGATCCTATAGCTGGAAATCCAGGTGTCAAGATA
CAACTGCAAAAGGAAGAAGACATCAATAGAAAGTCCTTAGAAGTGTTTGGCTCTTCAATA
ACAGAGAAAGAAAGAACCAAACTGAGTCTTGAGAAAAAGGTAAGTATGTTAACTTGGGAT
GCAATTGCTACAAAACCTGAAGAAATTGATATTATCAATATAGGAGCAAGTTCAAATGGA
ACATATGAAGATGATTATGCAGAAAGTGATGCAAGTTCAGATTTGTTTGAAATTGAAAGT
TTTCCAAGTAATAATACAGCAAATCCAAGTTTTGCTAGACAAGGTTCAGATGGCATGTCA
TGTTATGCTCCAAGTGAAGTTAGTATTGATTGGAGTGTTGTCACTGCTAGTGCTGCTGAT
TTCTCTATAATGTCTGATTCAGAAGAGACGAAAATACCCTCAATTAGAACCAAGTATGGG
AAAGAAACAGCAGGGAGAGAGAAAGCGAAACGTCGTTCGGGTATTCTTTTGGGATGTAAT
AGTCATAAGGCTGTTGGAGTTGTAGGAGATGCATATAAAGGTAGTGAAAAAACATCAATG
GAGATGACTCAAAGGCAGTTAAAGAATGAGTGTGTTGTGCCAATGACAAGGTTTCATGCT
GAGAGTAAGCTGAGTAGATTTGATGGAGGAAATAGGAAACATGAATTTACTACAAGATCA
TTCTCTAGTTCATATACTGAACGTCCTGCAGATTTCTTGTATATTTAG

Peptide Sequence

PEP ID

XP_016434061.1
PEP Infomation

PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 2-like [Nicotiana tabacum]
Sequence

MAMVKVTSALESNMPNNLNTKSGNNLLDASFSSYLNGTEDTFVHNLESSGNLSKKTDDGE
IDIFSAEKYFNEGVDEENQENVTNSEPQNKHRIDKPATNISSLKQNTRPKTPSIHSESSW
NSRSALLQNISRNHQHQPQANTNNKSYGKKFLARIGCNCYCKDKNSVKVDDQVGENSFNK
GKYHGKSKQNPIKTRSLAQSSESSTTGANHQDLHFKKIDELGFGKVPVFDPIAGNPGVKI
QLQKEEDINRKSLEVFGSSITEKERTKLSLEKKVSMLTWDAIATKPEEIDIINIGASSNG
TYEDDYAESDASSDLFEIESFPSNNTANPSFARQGSDGMSCYAPSEVSIDWSVVTASAAD
FSIMSDSEETKIPSIRTKYGKETAGREKAKRRSGILLGCNSHKAVGVVGDAYKGSEKTSM
EMTQRQLKNECVVPMTRFHAESKLSRFDGGNRKHEFTTRSFSSSYTERPADFLYI

Transcript Sequence

Gene sequence data has not been registered.